PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G27670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 325aa    MW: 35445.9 Da    PI: 9.0911
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G27670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.95.1e-33772181128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 
                      lp+G++F+Ptd+el+ e+L+ k++ ++      +   +    +i+   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++    
  ONIVA05G27670.1  77 LPAGVKFDPTDQELL-EHLEGKARPDSrklhplV---DefipTIEGEnGICYTHPERLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKVHsdev 165
                      799************.99****998885665442...133333665557**********.555666688******************8444555 PP

              NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                         + +W++tgk+++v++ +g+  g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  ONIVA05G27670.1 166 dggETRWHKTGKTRPVMA-NGRPRGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 218
                      544778************.999***********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEEEKGGWPE RSMTWCNSFS DVRTAVDSSL SPAAAVAAAA GKKAAASLAV LVKMCPSCGH  60
RARYEQETTT IQDLPGLPAG VKFDPTDQEL LEHLEGKARP DSRKLHPLVD EFIPTIEGEN  120
GICYTHPERL PGVSKDGLVR HFFHRPSKAY TTGTRKRRKV HSDEVDGGET RWHKTGKTRP  180
VMANGRPRGY KKILVLYTNY GKQRKPEKTN WVMHQYHLGS DEEERDGELV VSKVFFQTQP  240
RQCGSTAAAA AKEASAAVAA AVVNSNYSIV HGHQGGGGGS FLKEANVVHE FYDPAATMGY  300
RPPAPAAHFA PNFAVHAARN SFGGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-118NAC family protein