PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G24830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 23174.4 Da PI: 7.141 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.5 | 2.1e-31 | 134 | 192 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+++dp++v++tYeg+Hnh ONIVA05G24830.1 134 LDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKDDPSYVVTTYEGTHNHV 192 59********************************************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MAAVGAHAAV YHHPVSGLSA PAGDAAYSMS SYFSHGGSST SSSASSFSAA LAAATTPPLP 60 DPSGSQFDIS EFFFDDAPPA AVFNGAPTAA LPDGAAANAT RSAAEAVPAP APAAVERPRT 120 ERIAFRTKSE IEILDDGYKW RKYGKKSVKN SPNPRNYYRC STEGCNVKKR VERDKDDPSY 180 VVTTYEGTHN HVSPSTVYYA SQDAASGRFF VAGTQPPGSL N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 7e-40 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G24830.1 |