PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G21800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 402aa MW: 46147.5 Da PI: 5.0265 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.7 | 8.2e-16 | 43 | 90 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +l +++k++G ++Wk++ + + R++k+c++rw ++l ONIVA05G21800.1 43 KGPWTSWEDSILEKYIKKHGERNWKLVQKNTRLLRCGKSCRLRWMNHL 90 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 96 | 139 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ +++++++++G++ W++ a+ ++ gRt++++k++w++ ONIVA05G21800.1 96 KGAFSKEEENKIINLHRKMGNK-WSRMAADLP-GRTDNEIKNYWNT 139 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MHESDSDPDS DRTHWYMSNS DDESFVDKDK DCRRSTVAPL LKKGPWTSWE DSILEKYIKK 60 HGERNWKLVQ KNTRLLRCGK SCRLRWMNHL RPNLKKGAFS KEEENKIINL HRKMGNKWSR 120 MAADLPGRTD NEIKNYWNTR IKKCKNNRSP LYPANVCNDA LNEDQHESAD PNVREKLTNN 180 QLEDTTSMYF APQFSDASIS NILDRRLASK DYDSIEDQRN QIEVVAKYEI PLPVLKTTNN 240 DIFPSASIFA NHGISNGNLS ALSTTDALQM ELPLIQFDPN NQFVYSRAYA THLTNFALLN 300 DQSEELLNDT DVLNYVVMKE ELSGGSLSPT INMPCEAHNS MAASNELVVP RYEGDAPPLQ 360 DDFTSYFYLN DTNLSIFEDT NELFLENKLD TKGELVMACY VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.1 | 3e-58 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G21800.1 |