PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G21630.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 406aa    MW: 45555.7 Da    PI: 7.1082
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G21630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.29e-344498155
          G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     kprl+WtpeLH+rFv+av+qLGG+ekAtPkt+++lm+++gLtl+h+kSHLQkYRl
  ONIVA05G21630.1 44 KPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 98
                     79****************************************************8 PP
2Myb_DNA-binding68.41.2e-214697148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e+++++vdav+qlGg    t+kt++r mg  g+tl+++ks++qky+
  ONIVA05G21630.1 46 RLKWTPELHQRFVDAVNQLGGAekaTPKTVMRLMGiPGLTLYHLKSHLQKYR 97
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MYHQHQGRSD LFTTRTSFPM ERHLFLHGGN TQGDSGLVLS TDAKPRLKWT PELHQRFVDA  60
VNQLGGAEKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLSK NLQGQANVGT TKNGVADRIP  120
GTSALAMASA SAIPQAEKTI QIGEALQMQI EVQRQLNEQL EVQRHLQLRI EAQGKYLQAV  180
LEQAQETLGK QNLGPASLED AKIKISELVS QVSNECLSNA VTEIRESSSI HRLEPRQIQF  240
VESSANNCLT AAEGFKEHRL QNHGVLKAYD DSTLFCRKQS QDQESQYSLN RSLSERRMGH  300
LYSGKQYHKS EGSDSDTEVL HEYITPQKNG GGSTTSSTSG SKEINVEKLY LDEPSCKRQT  360
VDYQRESKLL DFDQQSSGKN LDLNTHNIDD NDQGYRHFDL NGFSWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.11e-100G2-like family protein