PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G21490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 494aa    MW: 51695.4 Da    PI: 6.1964
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G21490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS275.61.6e-841174852374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      + lL+ecA a+s g+l+ a+ +L +ls++asp++ +  +Rl+ayf++A+aarl++s+ ++++ ++p ++         aa++++++v P+ +++
  ONIVA05G21490.1 117 IALLMECAAAMSVGNLAGANGALLELSQMASPYAaSCGERLVAYFARAMAARLVGSWVGVVAPMAPPPSC----GAINAAFRALYNVAPFARLA 206
                      689******************************96778***********************999888885....6777899************* PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqG..lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                      +l++NqaIle ++g++ vHi+D+d+  G  lQW++Ll aLa+Rp+gpp +R+Tg+g     s+  l+ tg++La +A++l ++fef +++ +  
  ONIVA05G21490.1 207 YLACNQAILETFHGKRLVHIVDLDVVPGgaLQWLSLLPALAARPGGPPVIRVTGFGM----SASVLHDTGNQLAGLARKLCMSFEFYAVAKRPG 296
                      *************************988447**************************....9**************************877777 PP

             GRAS 187 edleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleakl 275
                      ++  + ++  ++ gEa+aV++    h ++d  ++        ++lv+ l+P  v++veqe  h+++    +Fl+rf++al++ysa+fd++ a+ 
  ONIVA05G21490.1 297 DADAVADMPGRRpGEAVAVHWLR--HAMYDAAGDDGA----SMRLVRWLEPAAVTLVEQERAHGGGgghgRFLDRFVSALHHYSAVFDAMGASR 384
                      7778888855555********98..777755555555....99*****************99955445669*******************9998 PP

             GRAS 276 pres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrp 366
                      p  +   r+  E+ +lgrei nv+a  g +r   +e  ++Wre l + GF  +  +      a+l+ + ++ + gy+v  + +g++ lgWk+ p
  ONIVA05G21490.1 385 PDGEdASRHLAEHGVLGREIANVLAVGGPARSSGREGPGSWREVLARHGFAHAGGGGG-GGRAQLVAAACPgGLGYTVAGDhDGTVRLGWKGTP 477
                      8877689999*****************************************9997765.567999999999999*****66166666******* PP

             GRAS 367 LvsvSaWr 374
                      L++vSaW+
  ONIVA05G21490.1 478 LYAVSAWT 485
                      *******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MQDSLGLMQF HDHHQYLYSS SSSNLPLQQP LLSHHHRFLE ANEGCAGEDD SPEFVEPPAA  60
AAAAGTFEQR PELGACKEVY SEEGGAAEER TGVAMAGADV EQVAVEDEEE AHGVRMIALL  120
MECAAAMSVG NLAGANGALL ELSQMASPYA ASCGERLVAY FARAMAARLV GSWVGVVAPM  180
APPPSCGAIN AAFRALYNVA PFARLAYLAC NQAILETFHG KRLVHIVDLD VVPGGALQWL  240
SLLPALAARP GGPPVIRVTG FGMSASVLHD TGNQLAGLAR KLCMSFEFYA VAKRPGDADA  300
VADMPGRRPG EAVAVHWLRH AMYDAAGDDG ASMRLVRWLE PAAVTLVEQE RAHGGGGGHG  360
RFLDRFVSAL HHYSAVFDAM GASRPDGEDA SRHLAEHGVL GREIANVLAV GGPARSSGRE  420
GPGSWREVLA RHGFAHAGGG GGGGRAQLVA AACPGGLGYT VAGDHDGTVR LGWKGTPLYA  480
VSAWTWCSPP HARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.14e-65GRAS family protein