PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G19780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 534aa MW: 57447.1 Da PI: 8.4673

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G19780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.4	1.6e-10	356	393	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + ONIVA05G19780.1 356 FEHflHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 393 554459******************************88 PP
2	BELL	91.9	6.4e-30	223	292	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e q +k++L+sl+e V+krY+qy++qlq+v+ssFe+vagl +a+p++s+Al+++S+hF+ Lk i +q+ ONIVA05G19780.1 223 AEQQWRKTRLISLMEDVCKRYRQYYQQLQAVVSSFETVAGLSNAAPFASMALRTMSKHFKYLKGIILNQL 292 58899*************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MSSAAGGGGG YGGGGGEHQH QQHHLLLGQA AGQLYHVPQH SRREKLRFPP DHPAESPPPP 60 PPGSWPLPPA FYSYASSSSS YSPHSPTLAH AQLVAHGMPP GAATSGGAQI PSQNFALSLS 120 SASSNPPPTP RRQFGGGGGG GGAAGPYGPF TGYAAVLGRS RFLGPAQKLL EEICDVGGRP 180 AQLDRGSDEG LLDVDAMDAA GSVDHEMDGS DRAVADAVTV SGAEQQWRKT RLISLMEDVC 240 KRYRQYYQQL QAVVSSFETV AGLSNAAPFA SMALRTMSKH FKYLKGIILN QLRNTGKGAT 300 KDGLGKEDTA NFGLMGGGAG LLRGNNVNSF SQPHNIWRPQ RGLPERAVSV LRAWLFEHFL 360 HPYPTDSDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHNLEMRQL QKNPSLDKNQ 420 LSMQHTQHSS DSSGKPCDPS NSLQGQSSSM TRNHSISASR HIEDGLSQMP HDISGQNNNR 480 AYIAEPLPAA LPLNLAHRFG LEDVSDAYVM SSFGGQDRHF TKEIGGHLLH DFVG

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MSSAAGGGGG YGGGGGEHQH QQHHLLLGQA AGQLYHVPQH SRREKLRFPP DHPAESPPPP  60
PPGSWPLPPA FYSYASSSSS YSPHSPTLAH AQLVAHGMPP GAATSGGAQI PSQNFALSLS  120
SASSNPPPTP RRQFGGGGGG GGAAGPYGPF TGYAAVLGRS RFLGPAQKLL EEICDVGGRP  180
AQLDRGSDEG LLDVDAMDAA GSVDHEMDGS DRAVADAVTV SGAEQQWRKT RLISLMEDVC  240
KRYRQYYQQL QAVVSSFETV AGLSNAAPFA SMALRTMSKH FKYLKGIILN QLRNTGKGAT  300
KDGLGKEDTA NFGLMGGGAG LLRGNNVNSF SQPHNIWRPQ RGLPERAVSV LRAWLFEHFL  360
HPYPTDSDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHNLEMRQL QKNPSLDKNQ  420
LSMQHTQHSS DSSGKPCDPS NSLQGQSSSM TRNHSISASR HIEDGLSQMP HDISGQNNNR  480
AYIAEPLPAA LPLNLAHRFG LEDVSDAYVM SSFGGQDRHF TKEIGGHLLH DFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	3e-68	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G19780.1