PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G19500.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 395aa    MW: 41055.4 Da    PI: 6.5107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G19500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-17163210555
              AP2   5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      GVr ++ +g+++AeIrd + ng  +r++lg+f t+e+Aa a+++a+++ +g
  ONIVA05G19500.1 163 GVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFNTPEQAALAYDQAALSVRG 210
                      9*****.**********44465..***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEPNYSDYHP NSVPFDAYYE HGHGHLDDHG HGHHHLIPAH PEPSYSYGNW SFLHADATAT  60
SSSESSSASA SSGAAHIVGA SGPSASFVRQ LHFGGEYYDD DAADISALME AASISCWTTN  120
GGAGASTSQT TGLEGVEVMR RAAAPAPDNG SSDKEEAARP LIGVRKRPWG KYAAEIRDST  180
RNGARVWLGT FNTPEQAALA YDQAALSVRG PGAVLNYPLH RVRESLRTLE LGAAAAASES  240
PVLTLKRRHR IRKRSTTKKA LAGKEADEAP ATTSSEGKKK RQVNTTSHSH DGAWRRHLLS  300
SGRLSTEGLT AAGGRGGLAG GRGEAAGSNV CAADNDEDGE AAAGSSVHVA NDDDDGSEAA  360
AVSSVHAADN DDEAVAGSGV RVTTTTAARR RSGAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-35ERF family protein