PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G19190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 391aa    MW: 42315.2 Da    PI: 6.1904
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G19190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2187.9e-06213232120
                      EEETTTTEEESSHHHHHHHH CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                      ++C+ C+k F+r  n++ H+
  ONIVA05G19190.1 213 FVCHVCNKAFNRYNNMQMHM 232
                      89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MVLRACTMVE GSSFVVVGGG GGVPFFEWLK PRSSPPPSPS SSSTTTTSSS LTAQRQPRGA  60
GTMLCLPLLG RLGEEPVDAD DGGAMNNPPV KEEVSNTTDD YAGVDLNIGL PATTGGCSSE  120
DAPMDEDEED DDDDDEEEET EDDEEKAAGL EGCKVEEEER EQVHSEGSKY YVSVGGGEDQ  180
SSNAGDVDAG AACRGRRYWI PTPAQILIGP VQFVCHVCNK AFNRYNNMQM HMWGHGREYR  240
KGPESLKGTQ ATATLAMLKL PCYCCAAGCR NNVGHPRARP LKDFRTLQTH YKRKHGAKPF  300
ACRRCAKPFA VKGDWRTHEK NCGKRWFCAC GSDFKHKRSL NDHVRSFGGG HFPVAAAAAA  360
AHAAAAPPKQ QQRIIRFDDA MAQMHGGGLM N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20880.17e-95C2H2 family protein