PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G18960.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 327aa MW: 34202.2 Da PI: 6.1685

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G18960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.5	1.2e-37	38	92	6	60
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC+s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ ONIVA05G18960.1 38 PNCPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 92 68***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MLSSHCESML AYAAAAGRRA VVVDHHQRRF RPNVEVAPNC PRCESPNTKF CYYNNYSLSQ 60 PRYFCKGCRR YWTKGGSLRN VPVGGGCRKN RRGKAVRAMV GETMTARDGG GGGAAAFSHR 120 FHGPVRPDMI LEGMAGSTAA SAGLGEQPGV AAPDEKPAAA DGSTIDLALL YAKFLNHHQP 180 TMAEQGGGAA VPESVDTSSG SSSDRTTSPA AAQPAAAAAY GPGQDGLVGE PISTEEHGAA 240 AMARCAQALG ELNFSVDQIS CYTSLGLPTT DGGDLILPST LDQHAKYEPF DSLPEDALSL 300 HDIISGDDDV WCNALGCQGL EAALCRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	6e-36	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G18960.1