PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G18090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 237aa MW: 25593.7 Da PI: 9.5513 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.1 | 1.7e-19 | 105 | 159 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t eq + Le+ F+ ++ +s++e++eLA klgL+ rqV vWFqNrRa+ k ONIVA05G18090.1 105 RKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTK 159 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 114.8 | 5.3e-37 | 105 | 193 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+ eq++lLE+sF++++ L++ +K+ela +Lgl++rqv+vWFqnrRARtk+kq+E d++ L+r++d+l+++n+rL+++ +eLr+ ONIVA05G18090.1 105 RKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRR 193 69*************************************************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDSVVDGGLD TRLSLAVGCC PPRRRPVLLF GEVLPSPEKK VAAAAVVAAG KRGREQRGEA 60 EAEATTTRQR RSCKKGRRGR GDDDDDDGDR RSPSGGGGDE EGASRKKLRL TGEQATLLED 120 SFRAHNILSH AEKQELAGKL GLSARQVEVW FQNRRARTKL KQTEADCDLL RRWCDHLAAD 180 NARLRRDLAE LRRSSSSPPV SGLAVATPVV CPSCAHDDKR RLAFATAAAA AGDMASN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 110 | SRKKLRL |
2 | 154 | 162 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 2e-27 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G18090.1 |