PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G17560.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 270aa    MW: 28027.2 Da    PI: 7.5074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G17560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-1591136251
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +y+GVr+++ +g+Wv+eIr+p +   r r +lg++ tae Aa a++aa  
  ONIVA05G17560.1  91 RYRGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATAEAAAVAHDAAVC 136
                      59****777.**********943...5*******************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MPRSGILYAR VEKVSADLAE PINGGRGGDT THTRRLVLTP PRTNELELRV ISEIVVAVSA  60
NDEQASPEGE DGTYMGRVAA SGGGGGGEMM RYRGVRRRRW GKWVSEIRVP GTRERLWLGS  120
YATAEAAAVA HDAAVCLLRL GGGRRAAAGG GGGLNFPARA LAAAAAASSY GGAGGLLSPR  180
SVQRVASDAG MVADAQLVDL RRDHPPAAAA ASSSGSGVAG DGARKQGTRG EVSDTYWCRN  240
GEDGSRSWSS GSEELIVYEG LSVDDMEILM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.13e-09ERF family protein