PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G15000.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 577aa    MW: 59858.4 Da    PI: 7.8031
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G15000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS230.39e-711745754374
             GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalklfsevsPilkf 93 
                       L +cAea++++  + a+a La +  +as dgd++qR+aa f+eA+a+ + r + ++++al ps++          e+ +a++ f +++P+l +
  ONIVA05G15000.1 174 HLRRCAEALAASRPADADAELASIARMASADGDAVQRVAAAFAEAMARVVIRPWRGVSAALFPSDAGAAGdaltAWEAEFARQSFLNLCPLLHL 267
                      6889*********************************************************66666544346767778888999********** PP

             GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                      + ++ N+ Ile + +++ +Hi+D++  + ++W+ Llq La+R+ +  p lR+T v++    +k+ l + ++ La   ++ gvp++ ++ v++++
  ONIVA05G15000.1 268 AAVAVNEIILETTRNDKFIHIVDLGGIHHAHWVELLQGLATRRaAVRPCLRLTIVHE----HKHFLGQAAQVLAAESDRHGVPLDLHI-VESSV 356
                      ****************************************98867799*********....99************************9.799** PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrll.........................desvsleserdevLklvkslsPkvvvvveqeadhnsesFle 255
                      e+l+l++L v+++ a+++ + lqlhrl+                           +++++s+ d++L+ +  lsP+ ++++e+ea+h  +sF +
  ONIVA05G15000.1 357 EALKLDALGVRSDHAVVIVSTLQLHRLVgagilsttappspaaaaaasmitspLPPANMSSKVDRLLRGFHLLSPRAIILIENEANHFVPSFTD 450
                      **************************************************9987788888899******************************* PP

             GRAS 256 rflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplse..kaakqaklllrkvks 346
                      rf++al yy  lf ++e+  ++++ er+  Er ll++ei++v+ac ++  r +rhetl++W  r+++aGF  +p  +  +aa  ++++ ++ ++
  ONIVA05G15000.1 451 RFASALPYYEQLFAAMEEA-GAATVERKAAERYLLREEIKDVIACDHDGpRWARHETLGRWVVRMGAAGFALAPAITvvTAAGRVRAVAARLPG 543
                      ****************887.78999*********************9988********************988765511445555666666654 PP

             GRAS 347 dg....yrveeesgslvlgWkdrpLvsvSaWr 374
                       g    y v e  g+l+l  +++p++ vSaWr
  ONIVA05G15000.1 544 GGderrYGVTEGGGWLILNREEKPMFCVSAWR 575
                      334566*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MEKGSSSTPS AANTSELMVA QAATAAATTT AAATTAAVPM TNFQLFGSMV PVPVASMATA  60
TAPAAVAAAD NGGHGSSSAS QNASGSGEGQ GGSMSLSLQL RPLGSTPTAA VAVSVPPMAA  120
APMMAGPAAA APAPAPPLAT MAVAQNASLA AVASALAAHR RNQATHRSAA LHGHLRRCAE  180
ALAASRPADA DAELASIARM ASADGDAVQR VAAAFAEAMA RVVIRPWRGV SAALFPSDAG  240
AAGDALTAWE AEFARQSFLN LCPLLHLAAV AVNEIILETT RNDKFIHIVD LGGIHHAHWV  300
ELLQGLATRR AAVRPCLRLT IVHEHKHFLG QAAQVLAAES DRHGVPLDLH IVESSVEALK  360
LDALGVRSDH AVVIVSTLQL HRLVGAGILS TTAPPSPAAA AAASMITSPL PPANMSSKVD  420
RLLRGFHLLS PRAIILIENE ANHFVPSFTD RFASALPYYE QLFAAMEEAG AATVERKAAE  480
RYLLREEIKD VIACDHDGPR WARHETLGRW VVRMGAAGFA LAPAITVVTA AGRVRAVAAR  540
LPGGGDERRY GVTEGGGWLI LNREEKPMFC VSAWRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.12e-31GRAS family protein