PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G13490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 269aa    MW: 27709 Da    PI: 7.8566
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G13490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-194998255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr+++ +g+WvAeIr+p++   r r +lg+f tae+Aa+a+++a++ l+g
  ONIVA05G13490.1 49 RYRGVRQRS-WGKWVAEIREPRK---RSRKWLGTFATAEDAARAYDRAALLLYG 98
                     59****999.**********954...5**********************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEPSDDACTV AAPAAETAAS SSGAGGGGGG GRTKKKAAGK GGPENGKFRY RGVRQRSWGK  60
WVAEIREPRK RSRKWLGTFA TAEDAARAYD RAALLLYGPR AHLNLTAPPP LPPPPPSSAA  120
ASSSSAASST SAPPPPPLRP LLPRPPHLHP AFHHQPFHHH LLQPQPPPTP PPLYYAATAS  180
TSTVTTTTTA PPPQLAAAAP AAVLVAAAVS STAETQAVVA TAPEDAASAA AAAAAEEEAA  240
WGFHGGDEED YAAALLWSEP DPWFDLFLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-18ERF family protein