PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G13280.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 628aa MW: 68651.6 Da PI: 8.724

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G13280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.6	9.9e-10	12	82	2	78
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78 pG + +P+d+elv yL ++++g++l+l e+d +++ P++L + +++ +e +f ++++ k+a+gkr++ ++ ONIVA05G13280.1 12 LPGPKLDPSDDELVGGYLLRRLQGQPLPL-----EADPLSARPRNLAAD-HGRGDEAFFLAEAQAKNAKGKRQRSTV 82 7999********************999.....79********844.456679999999999999999887644 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MAAAAAGADG LLPGPKLDPS DDELVGGYLL RRLQGQPLPL EADPLSARPR NLAADHGRGD 60 EAFFLAEAQA KNAKGKRQRS TVEGQSMCVD GGRLRVPDDG RGGGGLAFSH FLPLSPSIVP 120 SPAPSPRCST STPLSPPKLL ADHGRGDEAA FFADAWAKNG KRQKQRSTRL RVADDGGGGS 180 AFLPPSILPS LLPAPRCSTP LSPTSPPFRP SRVIVRWARP PPGWCKLNFD GSVFNDGSRR 240 ASIGGVIRDS DAGVVLAFAE TTEHWTVGVV EARAMIRGLR FALACFIERL EVEGDDLVLV 300 KLIRGEETET RIPAAMQAEI LNLLRCFAEV DVRHIYREGN SVAHTLCRQA YVCPGIWSQR 360 GGGMPAAVWD KVDDDRRGVV HERIRKNNGS VLGAVQTQRG VAKRFAQTDT VAHSKTGTGS 420 ALEQILVVSC WFYHQWCHYS SIEMKLEMNK VMRQWKWAPP PVGWCKLNFD GSVFNDGSRR 480 ASIGGVIRGC DGGVVLAFAE TTEHLTVGVV EARALIKGLK LALKCFVERI VVEGDDLVLV 540 QLLRGEETQT RIPAAMHDEI LSLLRRFTEF EVRHIYREGN SVAHTLCRQA YQGPGLWTER 600 VPMPGAVREK IDEDCRGVLH ERLCKKNK

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MAAAAAGADG LLPGPKLDPS DDELVGGYLL RRLQGQPLPL EADPLSARPR NLAADHGRGD  60
EAFFLAEAQA KNAKGKRQRS TVEGQSMCVD GGRLRVPDDG RGGGGLAFSH FLPLSPSIVP  120
SPAPSPRCST STPLSPPKLL ADHGRGDEAA FFADAWAKNG KRQKQRSTRL RVADDGGGGS  180
AFLPPSILPS LLPAPRCSTP LSPTSPPFRP SRVIVRWARP PPGWCKLNFD GSVFNDGSRR  240
ASIGGVIRDS DAGVVLAFAE TTEHWTVGVV EARAMIRGLR FALACFIERL EVEGDDLVLV  300
KLIRGEETET RIPAAMQAEI LNLLRCFAEV DVRHIYREGN SVAHTLCRQA YVCPGIWSQR  360
GGGMPAAVWD KVDDDRRGVV HERIRKNNGS VLGAVQTQRG VAKRFAQTDT VAHSKTGTGS  420
ALEQILVVSC WFYHQWCHYS SIEMKLEMNK VMRQWKWAPP PVGWCKLNFD GSVFNDGSRR  480
ASIGGVIRGC DGGVVLAFAE TTEHLTVGVV EARALIKGLK LALKCFVERI VVEGDDLVLV  540
QLLRGEETQT RIPAAMHDEI LSLLRRFTEF EVRHIYREGN SVAHTLCRQA YQGPGLWTER  600
VPMPGAVREK IDEDCRGVLH ERLCKKNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	79	KGKRQR

Link Out ? help Back to Top
Ensembl	ONIVA05G13280.1