PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G13190.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 487aa MW: 50966.2 Da PI: 8.0581

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G13190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.5	2.8e-33	190	248	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct++gC++kkkvers d+++++i+Y+g Hnh+k ONIVA05G13190.1 190 EDGYNWRKYGQKQVKGSENPRSYYKCTYNGCSMKKKVERSLADGRITQIVYKGAHNHPK 248 8********************************************************85 PP
2	WRKY	105.8	2.3e-33	351	409	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d+++v++tYeg+Hnh+ ONIVA05G13190.1 351 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDTRAVITTYEGKHNHD 409 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MASSTGGLDH GFTFTPPPFI TSFTELLSGG GGDLLGAGGE ERSPRGFSRG GARVGGGVPK 60 FKSAQPPSLP LSPPPVSPSS YFAIPPGLSP TELLDSPVLL SSSHILASPT TGAIPAQRYD 120 WKASADLIAS QQDDSRGDFS FHTNSDAMAA QPASFPSFKE QEQQVVESSK NGGAAASSNK 180 SGGGGNNKLE DGYNWRKYGQ KQVKGSENPR SYYKCTYNGC SMKKKVERSL ADGRITQIVY 240 KGAHNHPKPL STRRNASSCA TAAACADDLA APGAGADQYS AATPENSSVT FGDDEADNAS 300 HRSEGDEPEA KRWKEDADNE GSSGGMGGGA GGKPVREPRL VVQTLSDIDI LDDGFRWRKY 360 GQKVVKGNPN PRSYYKCTTV GCPVRKHVER ASHDTRAVIT TYEGKHNHDV PVGRGGGGGR 420 APAPAPPTSG AIRPSAVAAA QQGPYTLEML PNPAGLYGGY GAGAGGAAFP RTKDERRDDL 480 FVESLLC

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MASSTGGLDH GFTFTPPPFI TSFTELLSGG GGDLLGAGGE ERSPRGFSRG GARVGGGVPK  60
FKSAQPPSLP LSPPPVSPSS YFAIPPGLSP TELLDSPVLL SSSHILASPT TGAIPAQRYD  120
WKASADLIAS QQDDSRGDFS FHTNSDAMAA QPASFPSFKE QEQQVVESSK NGGAAASSNK  180
SGGGGNNKLE DGYNWRKYGQ KQVKGSENPR SYYKCTYNGC SMKKKVERSL ADGRITQIVY  240
KGAHNHPKPL STRRNASSCA TAAACADDLA APGAGADQYS AATPENSSVT FGDDEADNAS  300
HRSEGDEPEA KRWKEDADNE GSSGGMGGGA GGKPVREPRL VVQTLSDIDI LDDGFRWRKY  360
GQKVVKGNPN PRSYYKCTTV GCPVRKHVER ASHDTRAVIT TYEGKHNHDV PVGRGGGGGR  420
APAPAPPTSG AIRPSAVAAA QQGPYTLEML PNPAGLYGGY GAGAGGAAFP RTKDERRDDL  480
FVESLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	3e-95	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G13190.1