PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G13030.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 374aa MW: 40589.1 Da PI: 4.5279

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G13030.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.8	1.3e-18	87	137	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa a+++a+++++g ONIVA05G13030.2 87 CDFRGVRQRT-WGKWVAEIREP---N-RqSRLWLGTFPTAEAAACAYDEAARAMYG 137 689**999.******8...3.35**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MTVDQRTTAK AIMPPVEMPP VQPGRKKRPR RSRDGPTSVA ETIKRWAELN NQQELDPQGP 60 KKARKAPAKG SKKGCMKGKG GPENTRCDFR GVRQRTWGKW VAEIREPNRQ SRLWLGTFPT 120 AEAAACAYDE AARAMYGPMA RTNFGQHHAP AASVQVVAQA AVKCALPGGG LTASKSRTST 180 QGASADVQDV LTGGLSACES TTTTINNQSD VVSTLHKPEE VSEISSPLRA PPAVLEDGSN 240 EDKAESVTYD ENIVSQQRAP PEAEASNGRG EEVFEPLEPI ASLPEDQGDY CFDIDEMLRM 300 MEADPTNEGL WKGDKDGSDA ILELGQDEPF YYEGVDPGML DNLLRSDEPA WLSADPAMFI 360 SGGFEDDSQF FEGL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MTVDQRTTAK AIMPPVEMPP VQPGRKKRPR RSRDGPTSVA ETIKRWAELN NQQELDPQGP  60
KKARKAPAKG SKKGCMKGKG GPENTRCDFR GVRQRTWGKW VAEIREPNRQ SRLWLGTFPT  120
AEAAACAYDE AARAMYGPMA RTNFGQHHAP AASVQVVAQA AVKCALPGGG LTASKSRTST  180
QGASADVQDV LTGGLSACES TTTTINNQSD VVSTLHKPEE VSEISSPLRA PPAVLEDGSN  240
EDKAESVTYD ENIVSQQRAP PEAEASNGRG EEVFEPLEPI ASLPEDQGDY CFDIDEMLRM  300
MEADPTNEGL WKGDKDGSDA ILELGQDEPF YYEGVDPGML DNLLRSDEPA WLSADPAMFI  360
SGGFEDDSQF FEGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	65	RKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARK
2	27	67	RKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	2e-29	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G13030.2