PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G13030.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 419aa MW: 45176.2 Da PI: 4.5349

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G13030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.6	1.6e-18	132	182	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa a+++a+++++g ONIVA05G13030.1 132 CDFRGVRQRT-WGKWVAEIREP---N-RqSRLWLGTFPTAEAAACAYDEAARAMYG 182 689**999.******8...3.35**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTVDQRTTAK AIMPPVEMPP VQPGRKCGGE ESTGNLDSVQ PIGALPCNEH ALLAQQTPKG 60 DAPSVGSKIW KKRPRRSRDG PTSVAETIKR WAELNNQQEL DPQGPKKARK APAKGSKKGC 120 MKGKGGPENT RCDFRGVRQR TWGKWVAEIR EPNRQSRLWL GTFPTAEAAA CAYDEAARAM 180 YGPMARTNFG QHHAPAASVQ VVAQAAVKCA LPGGGLTASK SRTSTQGASA DVQDVLTGGL 240 SACESTTTTI NNQSDVVSTL HKPEEVSEIS SPLRAPPAVL EDGSNEDKAE SVTYDENIVS 300 QQRAPPEAEA SNGRGEEVFE PLEPIASLPE DQGDYCFDID EMLRMMEADP TNEGLWKGDK 360 DGSDAILELG QDEPFYYEGV DPGMLDNLLR SDEPAWLSAD PAMFISGGFE DDSQFFEGL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTVDQRTTAK AIMPPVEMPP VQPGRKCGGE ESTGNLDSVQ PIGALPCNEH ALLAQQTPKG  60
DAPSVGSKIW KKRPRRSRDG PTSVAETIKR WAELNNQQEL DPQGPKKARK APAKGSKKGC  120
MKGKGGPENT RCDFRGVRQR TWGKWVAEIR EPNRQSRLWL GTFPTAEAAA CAYDEAARAM  180
YGPMARTNFG QHHAPAASVQ VVAQAAVKCA LPGGGLTASK SRTSTQGASA DVQDVLTGGL  240
SACESTTTTI NNQSDVVSTL HKPEEVSEIS SPLRAPPAVL EDGSNEDKAE SVTYDENIVS  300
QQRAPPEAEA SNGRGEEVFE PLEPIASLPE DQGDYCFDID EMLRMMEADP TNEGLWKGDK  360
DGSDAILELG QDEPFYYEGV DPGMLDNLLR SDEPAWLSAD PAMFISGGFE DDSQFFEGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	110	KRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	3e-29	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G13030.1