PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G12100.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 322aa    MW: 33830.7 Da    PI: 5.8588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G12100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.61.2e-23117178159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg +WrKYGqKe+++s++p++Y+rCt++    C+++++v+r+++dp    +tY geH+++
  ONIVA05G12100.1 117 LDDGQAWRKYGQKEIQNSKHPKAYFRCTHKydqMCTAQRQVQRCDDDPASYRVTYIGEHTCR 178
                      58***************************99989*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MTSSMSPAPA PAYAQVMEDM EKGKELAAQL QGLLRDSPEA GRFVDQILHT FSRAMRALDK  60
AAVSAAGGEG SEVQSEVTCG GGASAGGKRK APAANRKANC RRRTQQSSGN TVVVKNLDDG  120
QAWRKYGQKE IQNSKHPKAY FRCTHKYDQM CTAQRQVQRC DDDPASYRVT YIGEHTCRDP  180
ATAPIIAAHV IHQVAAGDDD DGCGGLHAGS RLISFVAAPA APVDAAAAPT TSTITTVTAP  240
GPLLQPLKVE GSVGSSDQEE VLSSLTPGSS AARGGGVAGP FGPDQGDVTS SLHWSYDAVA  300
GMEFFKNDEV VFDLDDIMGL SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-24WRKY family protein