PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA05G12010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 127aa MW: 14393.8 Da PI: 9.5345 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.3 | 2.3e-17 | 3 | 52 | 8 | 57 |
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+L++ + ++ yp+++ r+eL+ klgLt++q ++WF+ rR k++k ONIVA05G12010.1 3 TPYQLEVLKRTYTEDLYPNETIRAELSVKLGLTDKQLQMWFCHRRLKDRK 52 89**********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 127 aa Download sequence |
MKTPYQLEVL KRTYTEDLYP NETIRAELSV KLGLTDKQLQ MWFCHRRLKD RKPPPKRQQL 60 EEDVHVPVMA PPPVLPPPLP HSKLTMAPGG MYGEQLLPSS SRRGTGRPSA ILDMSDLQCL 120 PLLTSHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G28420.1 | 2e-17 | HB-other family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA05G12010.1 |