PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G07450.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

DBB

Protein Properties

Length: 435aa MW: 45865.2 Da PI: 6.8976

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G07450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.4	4.4e-06	98	136	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ +e e++ C ++ lC+ C +H H ONIVA05G07450.1 98 LCSACEAAEASVLCCADEAALCARCDRDIHAAnrlagkH 136 7****99*******************544555555 PP
2	zf-B_box	30.8	6.2e-10	162	202	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e ++ +fC +++ llC++C ++ H H ONIVA05G07450.1 162 PPKCDICQESHAYFFCLEDRALLCRSCDVAVHTAnafvsaH 202 789****99*****************99545566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MVGSAFEFAI LRRISPQKKK QFVRPLGVET SANGSRRRRP TSTAPTNPFH SILHRPPPMS 60 PPPPPYYHHL LLLRSSPTTT GGGARVLAAA ELARMKLLCS ACEAAEASVL CCADEAALCA 120 RCDRDIHAAN RLAGKHLRLP LLSPASSSSS SAAALAPPPP SPPKCDICQE SHAYFFCLED 180 RALLCRSCDV AVHTANAFVS AHRRFLLTGV QVGQEQDEHS PDPPEPSPPP PPPPPASKSD 240 HPAPLYGEGG GGFSWDAADS PAAGGLPDWS AVDDQFGSPP PPRHTDTATV TTPPPTKRSP 300 RAPAFGGQGG MMDWPLGEFF GGFTDFTGGF GFGFGDSGTS KADSGKLGGS TDGSPYYRSS 360 SEDDRNADEL FGQVPEIQWS VPELPSPPTA SGLHWQRHPA ATHGGGGGPD TTAFVPDICS 420 PDSCFPATTS KRRRQ

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MVGSAFEFAI LRRISPQKKK QFVRPLGVET SANGSRRRRP TSTAPTNPFH SILHRPPPMS  60
PPPPPYYHHL LLLRSSPTTT GGGARVLAAA ELARMKLLCS ACEAAEASVL CCADEAALCA  120
RCDRDIHAAN RLAGKHLRLP LLSPASSSSS SAAALAPPPP SPPKCDICQE SHAYFFCLED  180
RALLCRSCDV AVHTANAFVS AHRRFLLTGV QVGQEQDEHS PDPPEPSPPP PPPPPASKSD  240
HPAPLYGEGG GGFSWDAADS PAAGGLPDWS AVDDQFGSPP PPRHTDTATV TTPPPTKRSP  300
RAPAFGGQGG MMDWPLGEFF GGFTDFTGGF GFGFGDSGTS KADSGKLGGS TDGSPYYRSS  360
SEDDRNADEL FGQVPEIQWS VPELPSPPTA SGLHWQRHPA ATHGGGGGPD TTAFVPDICS  420
PDSCFPATTS KRRRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	18	39	KKKQFVRPLGVETSANGSRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	4e-42	DBB family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G07450.1