PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G07370.6
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MIKC_MADS
Protein Properties Length: 175aa    MW: 19441.8 Da    PI: 5.1299
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G07370.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.51.3e-3151101151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
           SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                      krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+
  ONIVA05G07370.6  51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 101
                      79***********************************************95 PP

2K-box17.12.3e-071291596898
            K-box  68 kKnellleqieelqkkekelqeenkaLrkkl 98 
                       +ne+++++ie++q++e elq++n++ ++++
  ONIVA05G07370.6 129 AQNEYMCAEIEYMQRRETELQNDNMYSKSEM 159
                      589*********************9988776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ  60
VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVEETIER YKKANSDTSN  120
ASTVAEINAQ NEYMCAEIEY MQRRETELQN DNMYSKSEMK DKYGSVSCMC FLQGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42830.12e-52MIKC_MADS family protein