PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G07370.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MIKC_MADS

Protein Properties

Length: 511aa MW: 57819.2 Da PI: 7.5357

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G07370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.2	7.1e-31	51	101	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ ONIVA05G07370.1 51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 101 79***********************************************95 PP
2	SRF-TF	82.2	3.3e-26	316	364	3	51
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ie++ rqvtf+kR ng+lKKA+ELS LCdaeva+i+fss+g+lyeys+ ONIVA05G07370.1 316 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSN 364 99*********************************************95 PP
3	K-box	103.5	2.7e-34	119	215	4	100
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+ + + e +a+++qqe+akLk++i nLq+ +R l+G++++s++++eL+qLe +L+k+l kiR++Knell+++ie++q++e elq++n++L++k ONIVA05G07370.1 119 SNASTVVEINAQHYQQEAAKLKQQITNLQNANRTLVGDNITSMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSK 212 3344488999************************************************************************************ PP K-box 98 lee 100 ++e ONIVA05G07370.1 213 VAE 215 986 PP
4	K-box	45.6	3e-16	382	471	4	95
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLsl.keLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 s+ + ++e +a+++qqe+akLk+ i Lq+++R ++ +L+ L++ +L ++ +L +l+kiR++Kne+++++ie++q++e elq++n++ + ONIVA05G07370.1 382 SNASTVAEINAQHYQQEAAKLKQHITYLQNSNRFII--SLSCLDFfFQLDKVV-HLVIGLEKIRARKNEYMCAEIEYMQRRETELQNDNMYSK 471 44444999********************977765..788777524666664.5889*****************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ 60 VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVKETIER YKKANSDTSN 120 ASTVVEINAQ HYQQEAAKLK QQITNLQNAN RTLVGDNITS MNHRELKQLE GRLDKGLGKI 180 RARKNELLCA EIEYMQRRET ELQNDNMYLK SKVAESERGL QTVNMMGSAS TSEYVQNMIH 240 YDPRNFLQFN IMHQPQYYPE QEDRKAFMSG LALSREDLAI MHIYKEQEAE PSTGLMMPEP 300 APAASPGSGS SEGSGIEDTA DRQVTFCKRC NGLLKKAYEL SMLCDAEVAL IVFSSRGRLY 360 EYSNNSVEET IERYKKANSD TSNASTVAEI NAQHYQQEAA KLKQHITYLQ NSNRFIISLS 420 CLDFFFQLDK VVHLVIGLEK IRARKNEYMC AEIEYMQRRE TELQNDNMYS KSERTANSEH 480 DGLSIYERVR AKYDPLRSKK LPAIQYHAAA S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ  60
VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVKETIER YKKANSDTSN  120
ASTVVEINAQ HYQQEAAKLK QQITNLQNAN RTLVGDNITS MNHRELKQLE GRLDKGLGKI  180
RARKNELLCA EIEYMQRRET ELQNDNMYLK SKVAESERGL QTVNMMGSAS TSEYVQNMIH  240
YDPRNFLQFN IMHQPQYYPE QEDRKAFMSG LALSREDLAI MHIYKEQEAE PSTGLMMPEP  300
APAASPGSGS SEGSGIEDTA DRQVTFCKRC NGLLKKAYEL SMLCDAEVAL IVFSSRGRLY  360
EYSNNSVEET IERYKKANSD TSNASTVAEI NAQHYQQEAA KLKQHITYLQ NSNRFIISLS  420
CLDFFFQLDK VVHLVIGLEK IRARKNEYMC AEIEYMQRRE TELQNDNMYS KSERTANSEH  480
DGLSIYERVR AKYDPLRSKK LPAIQYHAAA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	2e-91	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G07370.1