PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G07120.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 356aa MW: 38059.6 Da PI: 9.9264

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G07120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.5	8.9e-12	163	207	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h Er+RR+++N++f Lr++lP+a +K +Ka++L +A +Y++ L ONIVA05G07120.1 163 HVLSERKRREKLNDSFKALRDVLPPA-----TKKDKASVLMRAKDYVNVL 207 7789*******************9.....9************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEEHDHQYAT PPSPSSSSFR SFSAGTTTTT SRDDNSSLML AAATAAASCH HQTEVSSQIL 60 LPRPGQAARR SSGGHGAATA FRPYSRYLGP KKHLLRRPGA ATTTTTGGGG GQRAFKKAIS 120 VLSKIHAARL AQYYQIMEMA ARASPAATGG GGGGENQPLQ LQHVLSERKR REKLNDSFKA 180 LRDVLPPATK KDKASVLMRA KDYVNVLKGR IAELEEKNRK LSESQQLHAG DGDGGERDDR 240 PDDDKIEVNM SRSPADHDSK CQELHLKIVL GSSSGCSAMD AVAGILQGLN EKRDVSLLAT 300 GHNSSSSGRR RLLPRAKSSQ QPASSSCDEE ILKESVVKDD SPAAVKDVMQ SVTLHG

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEEHDHQYAT PPSPSSSSFR SFSAGTTTTT SRDDNSSLML AAATAAASCH HQTEVSSQIL  60
LPRPGQAARR SSGGHGAATA FRPYSRYLGP KKHLLRRPGA ATTTTTGGGG GQRAFKKAIS  120
VLSKIHAARL AQYYQIMEMA ARASPAATGG GGGGENQPLQ LQHVLSERKR REKLNDSFKA  180
LRDVLPPATK KDKASVLMRA KDYVNVLKGR IAELEEKNRK LSESQQLHAG DGDGGERDDR  240
PDDDKIEVNM SRSPADHDSK CQELHLKIVL GSSSGCSAMD AVAGILQGLN EKRDVSLLAT  300
GHNSSSSGRR RLLPRAKSSQ QPASSSCDEE ILKESVVKDD SPAAVKDVMQ SVTLHG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	172	ERKRRE
2	168	173	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-18	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G07120.1