PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G06820.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 287aa    MW: 30463.5 Da    PI: 9.7714
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G06820.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.81.4e-14124168347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ +  +lG+g+W+ I+r++ ++Rt+ q+ s+ qky
  ONIVA05G06820.1 124 PWTEEEHRMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKY 168
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MARKCSSCGN NGHNSRTCSG QRVLDHSISS SNSGSTTAAA ATACGGLRLF GVQLQVGGGS  60
SPLKKCLSME CLASPAYYGA SASPSVSSSS SSLVSIEENT ERVSNGYLSD GLMGRVQERK  120
KGVPWTEEEH RMFLAGLDKL GKGDWRGISR HFVTTRTPTQ VASHAQKYFL RQNSMTQKKR  180
RSSLFDVVEG SKRAAAMPIS GSASELQIPG MSIGVGVVKE EVVLPPCLNL MSNSSSASQH  240
SPSLTLLANP QVQLQMPDLE LKMSTSRLSD QSGPSPSTPF FGTIRVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.13e-46MYB_related family protein