PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G03610.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | CPP | ||||||||
Protein Properties | Length: 419aa MW: 46710 Da PI: 8.0581 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 50.8 | 3.3e-16 | 118 | 157 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks+ClkkYCeCf+a+ Cs++C+C+dCkN e ONIVA05G03610.3 118 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 157 589***********************************65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPLPSNYYQ YVFSARVYCD 60 GCHCSPCGNK IENENIRKEA IETILLRNPL AFQPKIENSP NTVTVRKDNS EAIPPIPKHN 120 KGCHCRKSEC LKKYCECFQA NILCSKNCRC QDCKNFEGSE ERKALVQMKN ASDRNHIQEA 180 ANFALNGATT GSLGYKSSPV RRKKYQENSL GEQILSEAQF QPLASSCTGF GGDIAINYQS 240 KSSEMIYRSP LANTIPLIEV NDLVKNALVA CRKAPEAFLT KAGNKVEMQA EKQYQTNDEI 300 NNDKTKEQNL KEASLKDIQN KACIDRQNIN GTEPHLANSF KDSRPASPGT QALMCDEMDT 360 TFGNEDYRSP FVVPSRDQDI SELNADQERI VLTGLRDYLR VLITRGNING ECNLLTLLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 8e-65 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G03610.3 |