PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G03610.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | CPP | ||||||||
Protein Properties | Length: 446aa MW: 49805.4 Da PI: 7.9837 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 50.7 | 3.6e-16 | 113 | 152 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks+ClkkYCeCf+a+ Cs++C+C+dCkN e ONIVA05G03610.2 113 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 152 589***********************************65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence |
MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPYCECFAA RVYCDGCHCS 60 PCGNKIENEN IRKEAIETIL LRNPLAFQPK IENSPNTVTV RKDNSEAIPP IPKHNKGCHC 120 RKSECLKKYC ECFQANILCS KNCRCQDCKN FEGSEERKAL VQMKNASDRN HIQEAANFAL 180 NGATTGSLGY KSSPVRRKKY QENSLGEQIL SEAQFQPLAS SCTGFGGDIA INYQSKSSEM 240 IYRSPLANTI PLIEVNDLVK NALVACRKAP EAFLTKAGNK VEMQAEKQYQ TNDEINNDKT 300 KEQNLKEASL KDIQNKACID RQNINGTEPH LANSFKDSRP ASPGTQALMC DEMDTTFGNE 360 DYRSPFVVPS RDQDISELNA DQERIVLTGL RDYLRVLITR GNINEPNGRC HSNQILVRDS 420 NGIGFPEASW SNNCFFPRQI YVFQLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 1e-69 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G03610.2 |