PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G03610.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 451aa MW: 50451.1 Da PI: 8.1325

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G03610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.7e-16	118	157	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks+ClkkYCeCf+a+ Cs++C+C+dCkN e ONIVA05G03610.1 118 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 157 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPLPSNYYQ YVFSARVYCD 60 GCHCSPCGNK IENENIRKEA IETILLRNPL AFQPKIENSP NTVTVRKDNS EAIPPIPKHN 120 KGCHCRKSEC LKKYCECFQA NILCSKNCRC QDCKNFEGSE ERKALVQMKN ASDRNHIQEA 180 ANFALNGATT GSLGYKSSPV RRKKYQENSL GEQILSEAQF QPLASSCTGF GGDIAINYQS 240 KSSEMIYRSP LANTIPLIEV NDLVKNALVA CRKAPEAFLT KAGNKVEMQA EKQYQTNDEI 300 NNDKTKEQNL KEASLKDIQN KACIDRQNIN GTEPHLANSF KDSRPASPGT QALMCDEMDT 360 TFGNEDYRSP FVVPSRDQDI SELNADQERI VLTGLRDYLR VLITRGNINE PNGRCHSNQI 420 LVRDSNGIGF PEASWSNNCF FPRQIYVFQL S

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPLPSNYYQ YVFSARVYCD  60
GCHCSPCGNK IENENIRKEA IETILLRNPL AFQPKIENSP NTVTVRKDNS EAIPPIPKHN  120
KGCHCRKSEC LKKYCECFQA NILCSKNCRC QDCKNFEGSE ERKALVQMKN ASDRNHIQEA  180
ANFALNGATT GSLGYKSSPV RRKKYQENSL GEQILSEAQF QPLASSCTGF GGDIAINYQS  240
KSSEMIYRSP LANTIPLIEV NDLVKNALVA CRKAPEAFLT KAGNKVEMQA EKQYQTNDEI  300
NNDKTKEQNL KEASLKDIQN KACIDRQNIN GTEPHLANSF KDSRPASPGT QALMCDEMDT  360
TFGNEDYRSP FVVPSRDQDI SELNADQERI VLTGLRDYLR VLITRGNINE PNGRCHSNQI  420
LVRDSNGIGF PEASWSNNCF FPRQIYVFQL S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	4e-65	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G03610.1