PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G02040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 179aa MW: 19877.2 Da PI: 7.0156 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 87 | 1.6e-27 | 39 | 97 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++ r+YY+C+s gCp++k+v+++++d ++++itY+++Hnh+ ONIVA05G02040.1 39 ADSWSWRKYGQKPIKGSPHLRGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 97 69************************9877****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MTKMSSMKAD GSVPKRRRQD VQKVVVSLKD HKVEQGPPAD SWSWRKYGQK PIKGSPHLRG 60 YYKCSSYRGC PARKQVDKCR NDASLLIITY TSDHNHDNYA ATTTNSVQEQ AHNPDTSDPL 120 SNGMSLAEVV TVASSKLSGE EESCDFFDEL EELPVSASPL PSLSFMVQEC SFSDARTLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 8e-33 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G02040.1 |