PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G00700.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 1386aa    MW: 157936 Da    PI: 7.8095
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G00700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.52.7e-1073557201366
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l++lL++cA+av+++d   a++l++++++++spdgd++qRla+y++ +L+arla+  s++y++l +s+ts    ++ l+a++l+  ++P+ + s
  ONIVA05G00700.1 355 LRNLLIHCAQAVAADDRISASELVKKIRQHSSPDGDSNQRLAFYLVDGLEARLAGIESQVYRKLMASRTS---AESLLKAYSLYLSACPFERAS 445
                      689*************************************************************999998...89999**************** PP

             GRAS  95 hltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                      +  aNq+Il+a +g+  ++vHi+ f+i  G+QWp+L+q La+ ++gpp+lRiTg++ p++g    e +eetg+rLa++A+ ++vpf+++  +a+
  ONIVA05G00700.1 446 FAYANQTILDASKGQqpRKVHIVHFGICTGFQWPSLIQRLANEEGGPPKLRITGIDMPQPGfhPCEIIEETGKRLADYANLFKVPFQYQG-IAS 538
                      ***************999******************************************9999999***********************.7** PP

             GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                      r+e++++e+L+++++E+l+Vn+++++++l de vs++s+rd+vLk+++ ++P+v+++   + +++s+ F +rf e l +ys+lfd+++a++pr+
  ONIVA05G00700.1 539 RWETVQIEDLNIDKDEVLIVNCMFRMKNLGDEMVSMNSARDRVLKIMRMMNPRVFILGIVNGSYSSPFFITRFKEVLFHYSSLFDMIDANVPRD 632
                      ********************************************************************************************** PP

             GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                      +e+r+++Er l+g+e+ n++acegaer+er e++++W++r  +aGFk++p++  + k++  + + ++ + +  +e+ g+l++gWk+r+
  ONIVA05G00700.1 633 NEARKMIERGLFGQEALNIIACEGAERTERPESYKQWQARCLKAGFKQLPVDPATLKEIINMKKGIYHEDFVADEDGGWLLQGWKGRK 720
                      *******************************************************************999***************996 PP
2GRAS363.82.5e-111101613834374
             GRAS    4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95  
                       lL++cA+a++s+++  a++lL +++++a pdgd  qRla +f+ +L+arla+++s++y++l +++ts   + + l+a++l++ ++P+  +++
  ONIVA05G00700.1 1016 LLIQCAQAIASNNHPFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEKLMAKQTS---TRDMLKAYHLYFVACPFEMVTY 1104
                       8****************************************************************99...899******************* PP

             GRAS   96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185 
                          N++I +a+eg++++Hi+Df+i   +QWp+L+q La+R++gpp+lRiTgv+ p++g   +e++eetg+rLa++A+ ++vpf+++  +a+r
  ONIVA05G00700.1 1105 YFSNKTIIDALEGKTTLHIVDFGILFSFQWPCLIQRLAKREGGPPKLRITGVDVPQPGfrPHERIEETGKRLAEYANMFNVPFQYHG-IASR 1195
                       *********************************************************9*****************************.7*** PP

             GRAS  186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 
                       +e++ +e+L+++++E+l++n++ ++ +l de+ +++s+rd+vL+++k+++P+v+++   +  ++s+ Fl+rf e l +ys+lfd+l++++pr
  ONIVA05G00700.1 1196 WETICIEDLSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSSPFFLTRFREVLFHYSSLFDMLDNNVPR 1287
                       ******************************************************************************************** PP

             GRAS  278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369 
                       ++e+ri vE+ l+g+++ n+vacegaer+er e++++W++r+ +aGFk+ p+++ + +   +  + +++d + ++e+sg+l++gWk+r + +
  ONIVA05G00700.1 1288 NHEARILVEKDLFGNDALNAVACEGAERIERPESYKQWQMRILRAGFKQRPVNQAILNRSVHYKELYHED-FVIDEDSGWLLQGWKGRIIQA 1378
                       ******************************************************9999999999999955.********************* PP

             GRAS  370 vSaWr 374 
                       +S W+
  ONIVA05G00700.1 1379 LSTWK 1383
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1386 aa     Download sequence    
MVIELPFDNQ YTTTETEQPH DGSSCSSQQQ LSLYNYSPSD PQLFSQPTTG SRTYLSGAVT  60
IPGICNDKSN LGQQQFQIDA ALSLEYQRIR SSDALCYISR VLMEDVDERV DLHQGEAALQ  120
AAEKPFYDIL GQVYPPSLNR LALHSANEPD TPDESSSRNN YHNRYHSSHS SFNMLQPLPT  180
PLSPYSYGRS LFLPNQHLVS TAWTSTFGIP GFQIRRGAEE AKRFVPIIDK LVIDLDTDRG  240
LSISKMTTKA KVGDKKRYAI FELTDQRHSP YTTDLDILEG RNSKRYAITY CEIIRNDMFD  300
RVLLCYGVEN FAEASNLRKI MTKQARKNSL NGQTRGSAQR KLRGMKQLKK DVVDLRNLLI  360
HCAQAVAADD RISASELVKK IRQHSSPDGD SNQRLAFYLV DGLEARLAGI ESQVYRKLMA  420
SRTSAESLLK AYSLYLSACP FERASFAYAN QTILDASKGQ QPRKVHIVHF GICTGFQWPS  480
LIQRLANEEG GPPKLRITGI DMPQPGFHPC EIIEETGKRL ADYANLFKVP FQYQGIASRW  540
ETVQIEDLNI DKDEVLIVNC MFRMKNLGDE MVSMNSARDR VLKIMRMMNP RVFILGIVNG  600
SYSSPFFITR FKEVLFHYSS LFDMIDANVP RDNEARKMIE RGLFGQEALN IIACEGAERT  660
ERPESYKQWQ ARCLKAGFKQ LPVDPATLKE IINMKKGIYH EDFVADEDGG WLLQGWKGRK  720
SVKKKVTRNN PNINQPDVNK KITNFCFRSL KQCRSSIMDS PEYCQTNSNI TLDYINRILM  780
EEDIDEKISI KKGQDALQVT EKPFYDILGK AYPSSSKETA INGDSQADYP DNGSSSYHEQ  840
ACSGSFVSDL LGSQDAHSIT TDWSSEFDRL ALQFRRGVEE AKRFIPNIEK LVDDPEKNGL  900
YACKQTTETT EQKGKHENKI RNHPHDPHVE HIELMEARNS KHMAISTSET IRDEMFDSIL  960
LCNRQLPGEV ANLRGMMAKE ASDNPKKFQS KGYGKGQRKP HSSKKKQKEA IDLSVLLIQC  1020
AQAIASNNHP FASELLRKIR HHALPDGDGS QRLANCFADG LEARLAGTGS QMYEKLMAKQ  1080
TSTRDMLKAY HLYFVACPFE MVTYYFSNKT IIDALEGKTT LHIVDFGILF SFQWPCLIQR  1140
LAKREGGPPK LRITGVDVPQ PGFRPHERIE ETGKRLAEYA NMFNVPFQYH GIASRWETIC  1200
IEDLSIDKDE VLIINCMSRM RKLGDETENI DSARDRVLHM MKRMNPQVFI LGVVNGLYSS  1260
PFFLTRFREV LFHYSSLFDM LDNNVPRNHE ARILVEKDLF GNDALNAVAC EGAERIERPE  1320
SYKQWQMRIL RAGFKQRPVN QAILNRSVHY KELYHEDFVI DEDSGWLLQG WKGRIIQALS  1380
TWKVET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-162GRAS family protein