PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G27220.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 419aa    MW: 45707.5 Da    PI: 7.2425
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G27220.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.99.8e-33236290155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r+rWt++LHerFv++v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+
  ONIVA04G27220.2 236 KTRIRWTQDLHERFVDCVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 290
                      68****************************************************7 PP
2Myb_DNA-binding54.92.1e-17240289348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT++++e++vd+v+qlGg    t+k I + m+  g+t +++ks++qky+
  ONIVA04G27220.2 240 RWTQDLHERFVDCVNQLGGAdkaTPKGILKLMNsDGLTIYHIKSHLQKYR 289
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MNTKKIKLHD CHFGSPLCDP SPAPHLLSSA AAAGLSFHPG LVSSAAQHQQ HGAGGWLHEE  60
YYAPRSSPPS SLLAQTCVGS NATAFYAAEN LPQFDFPALG TAAAAAAKAP FRSSESELYR  120
PVDPLLLRAD HSVRTYYVRP QKRDSGERTP LPPPSQQQHQ DRIHGLFAGA PTTRLLSGEP  180
KIHSFPPQVA AKPILPAMDA PSLQNQMENQ LTRNCIGAAT PVTPTGNLAG SGAPSKTRIR  240
WTQDLHERFV DCVNQLGGAD KATPKGILKL MNSDGLTIYH IKSHLQKYRI AKYMPASSEG  300
KQLEKRATGN DMQNLDPKTG MQITEALRVQ LDVQRRLHEQ LEIQRNLQLR IEEQGKRLQK  360
MFEDQLKASR SVMEPQELDD VVAFAAGDGD DDAFDDVDVQ LLAVAGSGYD DAGFQSKIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.15e-67G2-like family protein