PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G27220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | G2-like | ||||||||
Protein Properties | Length: 438aa MW: 47707.1 Da PI: 6.9207 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.8 | 1e-32 | 255 | 309 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHerFv++v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+ ONIVA04G27220.1 255 KTRIRWTQDLHERFVDCVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 309 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 54.8 | 2.2e-17 | 259 | 308 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++vd+v+qlGg t+k I + m+ g+t +++ks++qky+ ONIVA04G27220.1 259 RWTQDLHERFVDCVNQLGGAdkaTPKGILKLMNsDGLTIYHIKSHLQKYR 308 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MVVVVVVVVG CFAILEIDIM NTKKIKLHDC HFGSPLCDPS PAPHLLSSAA AAGLSFHPGL 60 VSSAAQHQQH GAGGWLHEEY YAPRSSPPSS LLAQTCVGSN ATAFYAAENL PQFDFPALGT 120 AAAAAAKAPF RSSESELYRP VDPLLLRADH SVRTYYVRPQ KRDSGERTPL PPPSQQQHQD 180 RIHGLFAGAP TTRLLSGEPK IHSFPPQVAA KPILPAMDAP SLQNQMENQL TRNCIGAATP 240 VTPTGNLAGS GAPSKTRIRW TQDLHERFVD CVNQLGGADK ATPKGILKLM NSDGLTIYHI 300 KSHLQKYRIA KYMPASSEGK QLEKRATGND MQNLDPKTGM QITEALRVQL DVQRRLHEQL 360 EIQRNLQLRI EEQGKRLQKM FEDQLKASRS VMEPQELDDV VAFAAGDGDD DAFDDVDVQL 420 LAVAGSGYDD AGFQSKIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 9e-67 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G27220.1 |