PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA04G26640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 139aa MW: 14892.5 Da PI: 5.6612 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 68.2 | 1.5e-21 | 2 | 52 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr+++ +g+WvAeIr+p + +r++lg++gtae+Aa+a+++a++ + g ONIVA04G26640.1 2 TKYKGVRQRH-WGSWVAEIRHP-----HlkTRIWLGTYGTAEDAARAYDEAARLMSG 52 69*******9.**********8.....556**********************98766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 139 aa Download sequence |
MTKYKGVRQR HWGSWVAEIR HPHLKTRIWL GTYGTAEDAA RAYDEAARLM SGPAARTNFP 60 LSSSGGNARS CLSPTLRARL EKCCGAGSSA QAQQGAVAGQ DNDDAAAAAA AMGVDDGDEY 120 VEEMIQELTF YGSIEIVQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25190.1 | 4e-25 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA04G26640.1 |