PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G25910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25297.1 Da PI: 10.0931 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9.3e-17 | 61 | 110 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p + r+r++lg++ t+ Aa+a++ a +l+g ONIVA04G25910.1 61 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 110 69*****99.**********732...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MQGEYHRSSS EDSAASAAAA AAAAAAAMAP LAAAAAAVAA KEEQAAAAAV LPLQQQQPRR 60 QYRGVRMRKW GKWVAEIREP HKRTRIWLGS YATPVAAARA YDTAVFYLRG RSARLNFPEE 120 ISSLASLSEG GGASEPREPD GGTLSAASIR KKAIEVGSRV DALQTGMMVA PTTHHRERQK 180 HHHHHHHHPH LQPHGEEQHH HHEQKHQRTA WSGRAKNPDL NQAPSPENSD AE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 2e-42 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G25910.1 |