PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G24530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 25411.8 Da PI: 8.446 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 55.2 | 1.3e-17 | 59 | 105 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+ellP++ +K +K+++L +A++Y+ksLq ONIVA04G24530.1 59 FHNFSERRRRDRINEKLKALQELLPNC-----TKTDKVSMLDEAIDYLKSLQ 105 59*************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MEGIIKIDAS LGLDQLAAIG SLYQFIRGGG EGKEAASQEE EQTPKLRPTP TRRSRSAEFH 60 NFSERRRRDR INEKLKALQE LLPNCTKTDK VSMLDEAIDY LKSLQLQLQM LVMGKGMAPV 120 VPPELQQYMH YITADPSQIP PIRPSEPRPF QITHATQQRQ SNVESDFLSQ MQNLHPSEPP 180 QNFLRPPKLQ LYTPEQQRRG LASSSGHNSG WITERNSSYN FLE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 69 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 5e-32 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G24530.1 |