PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G24000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 22798 Da PI: 10.2507 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.3e-19 | 24 | 74 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp r +r++lg+f+tae Aa+a++ a++ ++g ONIVA04G24000.1 24 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDSAALHFRG 74 689*******.**********8...2.35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MAPRNAAEAV AVAVAEGGGA GMEPRFRGVR KRPWGRYAAE IRDPARKARV WLGTFDTAEA 60 AARAYDSAAL HFRGPKAKTN FPVAFAHAHH HAPPPPLPKA AALAVVSPTS STVESSSRDT 120 PAAAPVAAAA KAQVPASPSL DLSLGMSAMV AAQPFLFLDP RVAVTVAVAA PVPRRPAVVS 180 VKKEVARLDE QSDTGSSSSV VDASPAVGVG LDLNLPPPIE EA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 6e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G24000.1 |