PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G23530.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 309aa    MW: 32281.8 Da    PI: 10.5914
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G23530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.8e-31223280359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp ++++tYegeH+h+
  ONIVA04G23530.1 223 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPAMLVVTYEGEHRHT 280
                      9************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVDLMGCYA PRRADDQLAI QEAATAGLRS LEMLVSSLSS SSQAAGAHKA SPQQQPFGEI  60
ADQAVSKFRK VISILDRTGH ARFRRGPVES SAPAAPVAAA PPPPPPPPAP VAAALAPTSS  120
QPQTLTLDFT KPNLTMSAAT SVTSTSFFSS VTAGEGSVSK GRSLLSSGKP PLSGHKRKPC  180
AGGHSEATAN GGRCHCSKRR KNRVKRTIRV PAISSKIADI PPDEYSWRKY GQKPIKGSPY  240
PRGYYKCSTV RGCPARKHVE RATDDPAMLV VTYEGEHRHT PGPLPAPPAA AAVAAMPVSV  300
AVSTGNGHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.15e-77WRKY family protein