PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G22790.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 636aa    MW: 71656 Da    PI: 5.466
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G22790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS370.32.6e-1132626342374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                      ++lL++cA+a + +d+++ ++lL+++++++s +gd+ qRla++f++AL+arla+++s++y++l++++ts   + + l+a+kl++ ++P+ k+s+
  ONIVA04G22790.1 262 TTLLIHCAQAAAIDDHRNSNELLKQIRQRSSAYGDAGQRLAHCFANALEARLAGTGSNIYRSLAAKRTS---VYDILNAFKLYVTACPFKKISN 352
                      689**************************************************************9999...9********************* PP

             GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                      +   +aIl+a +g +r+Hi+D++i++G+QWp ++q +++Rp+gpps+RiTgv+ p++g   ++ +e+tg+rL+++A+ ++vpfe+++ +a +++
  ONIVA04G22790.1 353 FFSIEAILNASKGMTRLHIVDYGIQYGFQWPIFFQRISKRPGGPPSVRITGVDLPQPGfrPAQLIEATGRRLHDYARMFNVPFEYHA-IAAKWD 445
                      *********************************************************9*999*************************.799*** PP

             GRAS 188 dleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                      ++++e+L++++  +E l+Vn+ +++ +++de v+ +s+r +vLk++++++P+++++   +  +n++ F++rf eal yys+lfd+le++++r +
  ONIVA04G22790.1 446 TIRVEDLKIDKdkDELLVVNCLFRMRNMMDEMVTDDSPRMQVLKTIRKMNPNLFIHGVVNGTYNAPFFVTRFKEALFYYSSLFDMLETTASRVD 539
                      *********9999********************************************************************************* PP

             GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      e+r  +Er l+gre+ nvvaceg+er+er et+++W+ r  +aGFk++pl+++++k+a++ ++k + + + v+e+++++++gWk+r ++++SaW
  ONIVA04G22790.1 540 ENRLLIERDLFGREALNVVACEGTERVERPETYKQWQVRNIRAGFKQLPLNQETVKKARYKVKKSYHRDFLVDEDNKWMLQGWKGRIIFALSAW 633
                      ******************************************************************999************************* PP

             GRAS 374 r 374
                      +
  ONIVA04G22790.1 634 E 634
                      5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    
MLDSGSYDDV DYGDLFSIPN PPAPHLLNFP LQFFPSNGFI SSADDSHRSP AGMFGSTPSP  60
TSTTTELENS EDLSESADDA VLAYINQFLL EDEEDESCPG TITSVEDSAL LAVEKPFVDI  120
LTASQEACQE NSWIDSCCDF TGNGGLLDTF TTTHAACQPA PCEFEKEKGE CAVHKGRKNP  180
HDDCLLFEEE SRRSKQLAVS EEETVREMFD KVLLCNGECE LRAPLPAEAR NCGVYVKGSG  240
NKRGRKKGKS GASAEDDAVD LTTLLIHCAQ AAAIDDHRNS NELLKQIRQR SSAYGDAGQR  300
LAHCFANALE ARLAGTGSNI YRSLAAKRTS VYDILNAFKL YVTACPFKKI SNFFSIEAIL  360
NASKGMTRLH IVDYGIQYGF QWPIFFQRIS KRPGGPPSVR ITGVDLPQPG FRPAQLIEAT  420
GRRLHDYARM FNVPFEYHAI AAKWDTIRVE DLKIDKDKDE LLVVNCLFRM RNMMDEMVTD  480
DSPRMQVLKT IRKMNPNLFI HGVVNGTYNA PFFVTRFKEA LFYYSSLFDM LETTASRVDE  540
NRLLIERDLF GREALNVVAC EGTERVERPE TYKQWQVRNI RAGFKQLPLN QETVKKARYK  600
VKKSYHRDFL VDEDNKWMLQ GWKGRIIFAL SAWEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-155GRAS family protein