PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G22180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 463aa MW: 51184.8 Da PI: 6 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++l+++a +++G W++I +++g ++t+ q++s+ qk+ ONIVA04G22180.1 59 REKWTEDEHKLFLEALQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 103 789*****************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence |
MARFQETKAR NDQGPVADHV GHQNLMENLT DPLDSSGMDM MDEARIPKAR KPYTITKQRE 60 KWTEDEHKLF LEALQLHGRA WRRIQEHIGT KTAVQIRSHA QKFFSKVIKE SSGDNCNSLG 120 AAPSIQIPPP RPKRKPVHPY PRKLGSTASK NVPALKQLEK PQLQVQSLYD QDNGSPTSVL 180 TVPQIRADTL GSESGGSPTS TIDIEERCPT PSIATAELAM ELPPTNDEEV KGNGDHEEVT 240 CDRSGVPVLR LFGKRVMVND LHQMSAPDAG NLQTVADMEV DASVETPTSG TGKFSSHGAA 300 EANTWNPWLT NTQQFLYYLP NGQIFSVHSA LPCFTYHNEG VTCTQFSNPQ MVASDQQHQH 360 QTSEAVDYKG IQREGSWTES NTSSSSVPET ATHNSETTES YRNGNRNEDE MVPSPDSRKC 420 VSPGSNCRRG FVPYKRCVAD SEALLKSQAP QEEADGEMTR LCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37260.1 | 8e-35 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G22180.1 |