PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G21020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRF | ||||||||
Protein Properties | Length: 237aa MW: 25041.6 Da PI: 10.24 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79.9 | 2.3e-25 | 141 | 185 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e+ ONIVA04G21020.1 141 EPEPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRKPMEA 185 69***************************************9987 PP | |||||||
2 | QLQ | 54.2 | 4.5e-19 | 74 | 110 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k ONIVA04G21020.1 74 SALTFMQRQELEQQVLIYRYFAAGAPVPVHLVLPIWK 110 799*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLAEGRQVYS PPPPPPSKLP RLSGTDPTDG VVTMAAPSPL VLGLGLGLGG SGSDSSGSDA 60 EASAATVREA RPPSALTFMQ RQELEQQVLI YRYFAAGAPV PVHLVLPIWK SIAAASSFGP 120 QSFPSLTGLG SLCFDYRSSM EPEPGRCRRT DGKKWRCSRD VVPGHKYCER HVHRGRGRSR 180 KPMEASAAVA PTYLPVRPAL HTVATLATSA PSLSHLGFSS ASKVLLAHTT TGTTRAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 175 | 183 | GRGRSRKPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36400.1 | 2e-37 | GRF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G21020.1 |