PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G20830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 21222.3 Da PI: 8.9626 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.2e-16 | 17 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++g+Wv+eIr+p+ + +r++lg+f tae+Aa a++ a+++l+g ONIVA04G20830.1 17 FYRGIR--SRSGKWVSEIREPR----KaRRIWLGTFPTAEMAAVAYDVAARALRG 65 69***6..678*********94....36*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSDHGPPSPR SSGKHPFYRG IRSRSGKWVS EIREPRKARR IWLGTFPTAE MAAVAYDVAA 60 RALRGPDAAL NFPDLAASRT APPASSSADD IRAAAAAAAA SLQHDRAGGG IAPAASGSAH 120 QQRGGSSAAA RTTAGSGGAQ QEGSSGAGAG SHQYFLDEEA LFETPQFLRN MAAGMMMSPP 180 RLSPSSSDDS PDPSEAGGSL WSYRDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G20830.1 |