PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G20570.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Dof
Protein Properties Length: 363aa    MW: 35957.8 Da    PI: 8.6707
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G20570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.12.2e-3959120263
           zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                      kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  ONIVA04G20570.1  59 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 120
                      7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEEMLMAANA AAGANPNPAA TAPSSVTGGA LRGGGGGGAP PVAGGAGAGS TERRARPQKE  60
KALNCPRCNS TNTKFCYYNN YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS  120
SAASASPASA STANSVVTSA SMSMSMASTG GGASKNPKLV HEGAQDLNLA FPHHGGLQAP  180
GEFPAFPSLE SSSVCNPGGP MGTNGRGGGA LSAMELLRST GCYMPLQVPM QMPAEYATPG  240
FALGEFRAPP PPPQSSQSLL GFSLDAHGSV GGPSAAGFGS SAGLQGVPES TGRLLFPFED  300
LKPTVSSGTG GGGASGGGAG VDGGHQFDHG KEQQAGGGGG GPGGHDTPGF WNGMIGGGSG  360
TSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.11e-42Dof family protein