PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G19090.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 217aa    MW: 23014.6 Da    PI: 5.2825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G19090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-184695255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  ONIVA04G19090.1 46 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 95
                     69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDDSHDLASP TSPDTASSSS SSTSTSSSSA TVAPKKRPRN DGRHPTYRGV RMRSWGKWVS  60
EIREPRKKSR IWLGTFATAE MAARAHDVAA LAIKGRTAHL NFPDLAHLLP RPATAAPKDV  120
QAAALLAAAA ADFPSVSVDA NAKSPDTCSV ASAASPQPPP PDAEADPDST LFDLPDLLLD  180
LRYETSSSLS CGASWAVDDD VAGGVVFRLE EPMLWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-45ERF family protein