PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G19060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 247aa    MW: 26203.9 Da    PI: 4.5625
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G19060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-1963112255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr ++ +g+Wv+eIr+p++   + r++lg+f+tae+Aa+a++ a+++++g
  ONIVA04G19060.1  63 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFDTAEMAARAHDVAALAIKG 112
                      69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEQEQVMSQE SNSCTCSSSS NDASSAACSS LNASSPSSVD SGSAGGGGGG KKRPRSDHLK  60
HPTYRGVRMR SWGKWVSEIR EPRKKSRIWL GTFDTAEMAA RAHDVAALAI KGRTTHLNFP  120
DLAHLLPRAA SASPKDVQAA AALAAATASP APALSPTPCH DVDAAADDEP EPAEPEQATA  180
PVCIVENGTL QQDGGTGLDY TYFTMPDALL EFGFTLPPPP PPYYCGSPWD DDADDFFFGE  240
PLVLWEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35700.17e-43ERF family protein