PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G19040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 284aa MW: 29560.2 Da PI: 5.203 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.4e-19 | 116 | 166 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr+++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g ONIVA04G19040.1 116 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 166 57*****887.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MEADASHTPT TSSSVSVSFS SSSLSTSSST SSLVDNGAQD RPKSSKPKHA AKKRKRAAAE 60 EPANAAHGAG EDTSSCSTDD NAAASGKAQA GGGGGGVDSS STCTAASAPR SGFKHPSYRG 120 VRRRSWGKWV SEIREPRKKS RIWLGTFPTA EMAARAHDVA ALAIKGRNAH LNFPDSAHEL 180 PRPASTSPAD IQAAAAKAAA EVRCEEESSP SSSPTAEQPE EEAACPDTVH ADGGQDNALF 240 DLPDLLLDLR DGLWWSPVWP AALAAEEYDG GDAVVLNEPL LWAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 47 | 55 | PKHAAKKRK |
2 | 51 | 57 | AKKRKRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 8e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G19040.1 |