PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G18780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 247aa MW: 26800.3 Da PI: 7.838 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.7 | 4.4e-32 | 166 | 224 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+H+h+ ONIVA04G18780.1 166 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHTHT 224 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEGSQLETAC LPAALYAPLC PYTPPSPPSF LAPLPSLQHK LPQLPQLVHD HAAATGTNHG 60 VMFSSDHGCL YPLLPGIPFC LDSGCGAAAC DDDKPAGFAH LGSAEADTSA AAAARVDSEI 120 AAAATATTCH GPNSWWKGTE KGKMKVRRKM REPRFCFQTR SDVDVLDDGY KWRKYGQKVV 180 KNSLHPRSYY RCTHNNCRVK KRVERLSEDC RMVITTYEGR HTHTPCSDDA TTGAAGDHTA 240 SCAFTSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 2e-58 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G18780.1 |