PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G18740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GATA | ||||||||
Protein Properties | Length: 450aa MW: 49385.2 Da PI: 7.5406 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.2 | 1.7e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ ONIVA04G18740.1 7 CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41 ****************55555***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence |
MGKQGPCRHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLTNYTPMHA RDDIDAEEPR 60 ASKLKPPTLK LKEQKQLKKN PSHITMENGP FSDQNFRKMG DPDLSNRSGS GSALSYSESC 120 APYGTADASE MTASAQSHAW ESLVPSKRRS CVTRPKPSQM EKLAKDLNSI MHEEQLLYLS 180 GSSEEDLIYH SATPVDSFEM GYGSMLLRPN SKSLEEESEA SSIPADNKSY ITSESYSGSV 240 SFVYSESKAT SNQNVITEQP KKFLVQTSDN ARRANLHTEN QDTLENANSP LVSLHMEGKD 300 SEETRVKTSA SNRLTKSTMN PLKRPHDTHF QSSVELRGTM RSPKRVSKYG DAMGLKCQAS 360 FMPKPGNGKD LACSDRALNL FMLPPDKLSM LVPPQYANND SDQDLLLDVP LNARHPEAEL 420 LCQPSQLSSV AHSSTSEGGN AGGEGRLKQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 3e-56 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G18740.1 |