PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G15000.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 375aa    MW: 39669.6 Da    PI: 8.6585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G15000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11303348655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +++Er RR ri +++ +L+ l+P+     +k  s +++L +Av++Ik Lq
  ONIVA04G15000.1 303 SIAERERRTRISEKLRKLQALVPNM----DKQTSTSDMLDLAVDHIKGLQ 348
                      689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MNPAPSRAPQ RQQRGGEMSA RYGGGLQFFA DAPPAGVEGG AATARTFFPV PGGGGEQQPP  60
ERAMRQQHYG GGGSGAAEIS LGHGHGHGHG HGGQHHFHQF GVEAKDGGGG GGGDQSGFLT  120
RHNSSPPGFF SSPVMDNGFS SSARPAGSSL GEVRHGAMSS SSSNNKKMKA PLSFASSRQG  180
SGGLSQISED GIPDLTDSIH GAAHHHGRSE ENVSTHDHVV RSFSSGGFSI GSWEDSNSIV  240
FSTSTGKSGA HGNDDIIATL SNYESQLVAP REMAGVEKYL QMQHDQVPFR VRAKRGCATH  300
PRSIAERERR TRISEKLRKL QALVPNMDKQ TSTSDMLDLA VDHIKGLQSQ LQTLKEDKEK  360
CTCSCKQASR NRPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-44bHLH family protein