PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G13890.5

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 283aa MW: 29611.8 Da PI: 10.0109

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G13890.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.2	8.3e-34	39	97	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC v+k+ver+++d k v++tYeg+Hnhe ONIVA04G13890.5 39 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCLVRKHVERASHDLKSVITTYEGKHNHE 97 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MNECFRKLDS CATMDMSTAS RAVREPRVVI QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR 60 SYYKCTHPGC LVRKHVERAS HDLKSVITTY EGKHNHEVPA ARNSGHPAGS ASPGGGAGSS 120 SQPHGVGVGG RRPEVPSVQE SLMRLGGGCG AAPFPPHFGL HLPPPPPRDP LAPMSNFPYS 180 LGHAPSPALR GLPPPPPPPP SASALAVAGL GGVVEGLKYP MLAPPSVHSL LRHRQGGGME 240 AVVVPKAEVK QEAMPPAAAV AGAGRGAAVY QQAMSRVSLG NQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	9e-53	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G13890.5