PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G12040.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 797aa MW: 87705.1 Da PI: 6.657

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G12040.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	4e-52	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeel+ +yLkkkv +k++l evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk ONIVA04G12040.2 10 VPPGFRFHPTDEELLLYYLKKKVGFEKFDL-EVIREVDLNKIEPWDLQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRATTAGFWKATGRDKC 102 69**************************.99**********963433332566******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + + +++g++ktLvfy+grap+g+ktdW+mheyrle ONIVA04G12040.2 103 IRT-SYRKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 139 9.8999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MAAFSSSNGV PPGFRFHPTD EELLLYYLKK KVGFEKFDLE VIREVDLNKI EPWDLQERCR 60 IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD KCIRTSYRKI GMRKTLVFYR 120 GRAPHGQKTD WIMHEYRLED ADDSQSASSE DGWVVCRVFK KKCFFKIGGG GGGEGSGGSQ 180 GGDVGGGHLA VSPPLGGGHA MAAASHYMHP HHQYHHHHHH AAAASPFYYT QMPPPAAAAP 240 PHAAYSHHVQ VQDLLTNHRP SADAGYDFSG LPAVDHHHHH PGLDVGSSDG GGGVAAGGAD 300 GDQAAAAAAA GSTDQQQWQA MDGFSNGGAG AAAAVQQQLG AMSSGQRGGE MDLWGYGRLT 360 FYIFGNASPS NLTQASYIIE AFQKCHVDHP VKKFFGECTD LKIKLDQCFR QETSRGAGER 420 EKMDPVPLFN PCEMGRFTFS HRIVLAPLTR ARSYGNLPQS HAILYYSQRA TKGGLLISEA 480 TGVSSDAPCT NTPGIWTKEQ VEAWKPVVDA VHAKGGIFFC QIWHVGRASD LEQEPISSTD 540 KPVEKNEDMD FPVPRRLAVE EIPDVINHFR IAARNAIDAG FDGVEVHGAH GFLLEQFMKD 600 GVNDRADEYG GSLQNRCRFA LEVIDAVSTE VGPDRVGFRI SPYISYYGCH DSDPDALGVY 660 MARELDRRGV LYCSVVEPEM VAATTVVDCE TTTTMSRRMM IPHRLHGMRE AFRRGMFMVG 720 GGYDRDAGNM AVASGYADMV VFGRLFLANP DLPRRFQLDA PLNKYDRATF YTHDPVVGYT 780 DYPFLDDDRE AMSDHTG

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MAAFSSSNGV PPGFRFHPTD EELLLYYLKK KVGFEKFDLE VIREVDLNKI EPWDLQERCR  60
IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD KCIRTSYRKI GMRKTLVFYR  120
GRAPHGQKTD WIMHEYRLED ADDSQSASSE DGWVVCRVFK KKCFFKIGGG GGGEGSGGSQ  180
GGDVGGGHLA VSPPLGGGHA MAAASHYMHP HHQYHHHHHH AAAASPFYYT QMPPPAAAAP  240
PHAAYSHHVQ VQDLLTNHRP SADAGYDFSG LPAVDHHHHH PGLDVGSSDG GGGVAAGGAD  300
GDQAAAAAAA GSTDQQQWQA MDGFSNGGAG AAAAVQQQLG AMSSGQRGGE MDLWGYGRLT  360
FYIFGNASPS NLTQASYIIE AFQKCHVDHP VKKFFGECTD LKIKLDQCFR QETSRGAGER  420
EKMDPVPLFN PCEMGRFTFS HRIVLAPLTR ARSYGNLPQS HAILYYSQRA TKGGLLISEA  480
TGVSSDAPCT NTPGIWTKEQ VEAWKPVVDA VHAKGGIFFC QIWHVGRASD LEQEPISSTD  540
KPVEKNEDMD FPVPRRLAVE EIPDVINHFR IAARNAIDAG FDGVEVHGAH GFLLEQFMKD  600
GVNDRADEYG GSLQNRCRFA LEVIDAVSTE VGPDRVGFRI SPYISYYGCH DSDPDALGVY  660
MARELDRRGV LYCSVVEPEM VAATTVVDCE TTTTMSRRMM IPHRLHGMRE AFRRGMFMVG  720
GGYDRDAGNM AVASGYADMV VFGRLFLANP DLPRRFQLDA PLNKYDRATF YTHDPVVGYT  780
DYPFLDDDRE AMSDHTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	8e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G12040.2