PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G11950.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 193aa    MW: 20721.4 Da    PI: 5.7692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G11950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-182171155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++y+GVr++k +g+Wv+eIr p   g ++r++lg+f +ae+Aa a++ a+++l+g
  ONIVA04G11950.1 21 CQYRGVRRRK-WGKWVSEIRQP---GTKTRIWLGSFESAEMAAVAHDVAALRLRG 71
                     68*****998.**********8...325*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MVVAMGRSSS AMAAAAAGGG CQYRGVRRRK WGKWVSEIRQ PGTKTRIWLG SFESAEMAAV  60
AHDVAALRLR GRDAQLNFPG SVDRLPRPAS SRPGDIRAAA AEAADRVRRE PALVVVRGAA  120
AAGGELAAAR WAGVEVEVEQ QLGGSDEEFE VDSPRLWAEM AEAMLLDPPV WAVDVSEMEG  180
PHCWAHGSLW DAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.18e-25ERF family protein